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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809926.1_cds_XP_016496003.1_10269
CDS Infomation

[gene=LOC107815010] [db_xref=GeneID:107815010] [protein=7-hydroxymethyl chlorophyll a reductase, chloroplastic-like] [protein_id=XP_016496003.1] [location=complement(join(35322..35412,35496..35590,35701..35765,36567..36624,36712..36781,36893..36972,38022..38049,38534..38595,38674..38709,39530..39627,40626..40688,40783..40834,42853..42931,43027..43068,43475..43559,43759..43870,45180..45264,47318..47408,47550..47619))] [gbkey=CDS]
Sequence

ATGGCGTTGCTCACTGGAAACATCTCTTCTTTACCTTTCAACTTTTACACTGTTTCTTCC
TCATCACAAGAATCGAAAGCAGTGAAAATTAGAGAAGATTGGAGGAAAAAATCACGACCT
ATTCCTCCTGGTGGGACTTATCCAGCTAAGGACCACTGCAGCCAATGTGGTTTATGCGAC
TCTTACTACATTGCCCATGTCAAGAATGCATGTGCTTTCTTGGGGGATGGCATGTCTAGA
ATTGAAGCTTTGGAGCCTATTGTCCACGGACGAGGACGGAAAGAAGATTCGTTGGATGAG
ATTTATATGGGAGTGTATGAGAATCTGTTGTATGCTCGTAAAACTCAGCCTGTGGAAGGA
GCTCAATGGACGGGGATAGTGACAACTATTGCAGTGGAGATGCTAAAAGCTGGGATGGTG
GAGGCTGTTGTTTGTGTTCAGAGTGATCCAGAAGATCGATTTACTCCCCGACCTGTCCTG
GCAAGGACTCCAGAGGAAGTTATAGCAGCTAAAGGTGTCAAGCCAACACTGTCTCCTAAT
CTAAATACTCTCGCCTTAGTTGAGGCAGCTGGTGTAAAGCGACTTCTGTTCTGCGGTGTT
GGCTGCCAAGTGCAAGCTTTAAGATCAGTGGAGCAATATTTGAATCTGGAAAAGCTATAT
GTTCTAGGCACTAACTGTGTGGATAATGGAAAACGAGAAGGCTTAGATAAGTTTCTGAAG
GCCGCTAGCAGTGAACCTGAAACAGTTCTTCACTATGAGTTTATGCAAGACTACAAGGTC
CATCTGAAGCATTTAGATGGTCATATTGAAGAGGTTCCCTATTTCTGTTTACCAGCAAAT
GAGTTAGTTGATGTTATTGCACCATCTTGTTACAGCTGTTTTGATTACACAAATGGCTTG
GCGGATTTGGTGGTGGGATACATGGGTGTACCAAAATATAGTGGAATCAACATGATGCAG
CATCCACAATATGTTACGGTCAGAAATGAACGTGGTAGAGAAATGCTAAGCCTTGTCGAG
AACCTTTTGGAAATTACTCCAACGATAAGTAGTGGTAACCGGCGTCCATTTGTCGTAGAA
ACCGTAAAGGCAGATGATGAAGCAAAATTTGGAAGAGGTCCTGCTCAACCTGCTCCAAAG
TTTGTTGGAAATTTAATTGCATTTTTTCTCAACATAGTCGGACCGAAGGGTCTAGAATTT
GCACGTTACTCACTAGATTACCACACAATCAGAAATTATTTACATGTAGTCCGCAAGTGG
GGAAAGGAAAGAGCTGACAGACACATGCCAGCATATGCAAAGAAAATTGTTAGCATGTAC
AATCAGAGTGGAGAAATTGATCAAATGCTTTCCAGCAAGTGA

Peptide Sequence

PEP ID

XP_016496003.1
PEP Infomation

PREDICTED: 7-hydroxymethyl chlorophyll a reductase, chloroplastic-like [Nicotiana tabacum]
Sequence

MALLTGNISSLPFNFYTVSSSSQESKAVKIREDWRKKSRPIPPGGTYPAKDHCSQCGLCD
SYYIAHVKNACAFLGDGMSRIEALEPIVHGRGRKEDSLDEIYMGVYENLLYARKTQPVEG
AQWTGIVTTIAVEMLKAGMVEAVVCVQSDPEDRFTPRPVLARTPEEVIAAKGVKPTLSPN
LNTLALVEAAGVKRLLFCGVGCQVQALRSVEQYLNLEKLYVLGTNCVDNGKREGLDKFLK
AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNGL
ADLVVGYMGVPKYSGINMMQHPQYVTVRNERGREMLSLVENLLEITPTISSGNRRPFVVE
TVKADDEAKFGRGPAQPAPKFVGNLIAFFLNIVGPKGLEFARYSLDYHTIRNYLHVVRKW
GKERADRHMPAYAKKIVSMYNQSGEIDQMLSSK

Transcript Sequence

Gene sequence data has not been registered.